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Bra003840 protein (Brassica rapa) - STRING interaction network
"Bra003840" - AT1G73600 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003840AT1G73600 (E=7e-281) | methyltransferase/ phosphoethanolamine N-methyltransferase (506 aa)    
Predicted Functional Partners:
Bra030681
AT1G07420 (E=2e-155) ATSMO2, SMO2-1 | SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase (517 aa)
     
  0.973
Bra016126
AT1G71697 (E=1e-176) ATCK1, CK | ATCK1 (CHOLINE KINASE 1); choline kinase (346 aa)
         
  0.933
Bra015921
AT1G74320 (E=2e-183) | choline kinase, putative (346 aa)
         
  0.933
Bra041066
AT4G15130 (E=4e-123) ATCCT2, CCT2 | catalytic/ choline-phosphate cytidylyltransferase/ nucleotidyltransferase (284 aa)
         
  0.933
Bra040693
AT4G15130 (E=5e-128) ATCCT2, CCT2 | catalytic/ choline-phosphate cytidylyltransferase/ nucleotidyltransferase (304 aa)
         
  0.933
Bra032470
AT2G32260 (E=8e-143) ATCCT1, CCT1 | cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP-phosphocholine cytidylyltransferase, putative (325 aa)
         
  0.933
Bra022881
AT2G32260 (E=1e-154) ATCCT1, CCT1 | cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP-phosphocholine cytidylyltransferase, putative (326 aa)
         
  0.933
Bra012049
AT2G26830 (E=8e-167) emb1187 | emb1187 (embryo defective 1187); kinase/ phosphotransferase, alcohol group as acceptor (382 aa)
     
 
  0.902
Bra017108
AT2G38670 (E=9e-201) PECT1 | PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1); ethanolamine-phosphate cytidylyltransferase (409 aa)
         
  0.900
Bra039978
AT2G29390 (E=6e-139) ATSMO2 | SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase (321 aa)
       
  0.892
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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