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Bra003851 protein (Brassica rapa) - STRING interaction network
"Bra003851" - AT1G73230 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003851AT1G73230 (E=7e-064) | nascent polypeptide-associated complex (NAC) domain-containing protein (164 aa)    
Predicted Functional Partners:
Bra038716
AT3G12390 (E=1e-037) | nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative (133 aa)
     
 
  0.998
Bra037920
AT4G10480 (E=5e-060) | nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative (212 aa)
     
 
  0.998
Bra034757
AT3G12390 (E=8e-049) | nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative (204 aa)
     
 
  0.998
Bra012259
AT4G10480 (E=1e-055) | nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative (192 aa)
     
 
  0.998
Bra008797
AT3G12390 (E=2e-047) | nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative (208 aa)
     
 
  0.998
Bra001450
AT3G12390 (E=5e-047) | nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative (189 aa)
     
 
  0.998
Bra000711
AT4G10480 (E=5e-051) | nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative (208 aa)
     
 
  0.998
Bra001911
AT3G23390 (E=5e-047) | 60S ribosomal protein L36a/L44 (RPL36aA) (105 aa)
     
        0.969
Bra023728
AT3G23390 (E=2e-033) | 60S ribosomal protein L36a/L44 (RPL36aA) (79 aa)
     
        0.969
Bra014945.1-P
AT3G23390 (E=5e-047) | 60S ribosomal protein L36a/L44 (RPL36aA) (105 aa)
     
        0.969
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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