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Bra003911 protein (Brassica rapa) - STRING interaction network
"Bra003911" - AT1G71830 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra003911AT1G71830 (E=4e-221) SERK1, ATSERK1 | SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1); kinase/ transmembrane receptor protein serine/threonine kinase (571 aa)    
Predicted Functional Partners:
Bra033615
AT4G39400 (E=0.0) BRI1, CBB2, DWF2, BIN1, ATBRI1 | BRI1 (BRASSINOSTEROID INSENSITIVE 1); kinase/ protein binding / protein heterodimerization/ protein homodimerization/ protein kinase/ protein serine/threonine kinase (1194 aa)
       
 
0.921
Bra011862
AT4G39400 (E=0.0) BRI1, CBB2, DWF2, BIN1, ATBRI1 | BRI1 (BRASSINOSTEROID INSENSITIVE 1); kinase/ protein binding / protein heterodimerization/ protein homodimerization/ protein kinase/ protein serine/threonine kinase (1194 aa)
       
 
0.921
Bra010684
AT4G39400 (E=0.0) BRI1, CBB2, DWF2, BIN1, ATBRI1 | BRI1 (BRASSINOSTEROID INSENSITIVE 1); kinase/ protein binding / protein heterodimerization/ protein homodimerization/ protein kinase/ protein serine/threonine kinase (1174 aa)
       
 
0.914
Bra002223
AT5G19280 (E=8e-241) KAPP, RAG1 | KAPP (KINASE ASSOCIATED PROTEIN PHOSPHATASE); phosphoprotein phosphatase/ protein kinase binding / protein serine/threonine phosphatase (571 aa)
       
 
  0.793
Bra011033
AT4G28490 (E=0.0) RLK5, HAE | HAE (HAESA); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase (753 aa)
     
 
0.666
Bra022679
AT5G53890 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative (939 aa)
     
 
0.624
Bra001297
AT3G09840 (E=0.0) CDC48, ATCDC48, CDC48A | CDC48 (CELL DIVISION CYCLE 48); ATPase/ identical protein binding (809 aa)
       
 
  0.624
Bra003026
AT5G53890 (E=0.0) | leucine-rich repeat transmembrane protein kinase, putative (999 aa)
     
 
0.624
Bra026610
AT2G02220 (E=0.0) ATPSKR1, PSKR1 | PSKR1 (PHYTOSULFOKIN RECEPTOR 1); ATP binding / peptide receptor/ protein serine/threonine kinase (943 aa)
     
   
0.623
Bra015079
AT3G24770 (E=8e-017) CLE41 | CLE41 (CLAVATA3/ESR-RELATED 41); protein binding / receptor binding (55 aa)
       
      0.622
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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