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Bra004085 protein (Brassica rapa) - STRING interaction network
"Bra004085" - AT1G67490 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004085AT1G67490 (E=0.0) GCS1, KNF | GCS1 (GLUCOSIDASE 1); alpha-glucosidase (846 aa)    
Predicted Functional Partners:
Bra006514
AT5G19690 (E=0.0) STT3A | STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A); oligosaccharyl transferase (778 aa)
     
 
  0.955
Bra002255
AT5G19690 (E=0.0) STT3A | STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A); oligosaccharyl transferase (781 aa)
     
 
  0.955
Bra024240
AT5G63840 (E=0.0) RSW3 | RSW3 (RADIAL SWELLING 3); glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds (921 aa)
     
  0.950
Bra028034
AT1G34130 (E=0.0) STT3B | STT3B (staurosporin and temperature sensitive 3-like b); oligosaccharyl transferase (725 aa)
     
 
  0.948
Bra031396
AT1G61790 (E=5e-139) | OST3/OST6 family protein (346 aa)
     
  0.938
Bra031396.1-P
AT1G61790 (E=5e-139) | OST3/OST6 family protein (346 aa)
     
  0.938
Bra037156
AT5G66680 (E=1e-215) DGL1 | DGL1; dolichyl-diphosphooligosaccharide-protein glycotransferase ; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (435 aa)
     
  0.905
Bra012091
AT5G66680 (E=7e-215) DGL1 | DGL1; dolichyl-diphosphooligosaccharide-protein glycotransferase ; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (437 aa)
     
  0.905
Bra026638
AT2G01720 (E=2e-231) | ribophorin I family protein ; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (461 aa)
     
 
  0.902
Bra024861
AT2G01720 (E=8e-238) | ribophorin I family protein ; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (462 aa)
     
 
  0.902
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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