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Bra004110 protein (Brassica rapa) - STRING interaction network
"Bra004110" - AT1G65290 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004110AT1G65290 (E=7e-050) mtACP2 | mtACP2 (mitochondrial acyl carrier protein 2); acyl carrier/ metal ion binding ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (183 aa)    
Predicted Functional Partners:
Bra037584
AT3G18410 (E=1e-059) | NADH-ubiquinone oxidoreductase-related (106 aa)
     
  0.998
Bra007427
AT3G18410 (E=6e-060) | NADH-ubiquinone oxidoreductase-related (106 aa)
     
  0.998
Bra007427.1-P
AT3G18410 (E=6e-060) | NADH-ubiquinone oxidoreductase-related (106 aa)
     
  0.998
Bra001706
AT3G18410 (E=2e-059) | NADH-ubiquinone oxidoreductase-related (106 aa)
     
  0.998
Bra034645
AT4G34700 (E=9e-040) | complex 1 family protein / LVR family protein (155 aa)
     
  0.987
Bra017671
AT4G34700 (E=2e-066) | complex 1 family protein / LVR family protein (117 aa)
     
  0.987
Bra011553
AT4G34700 (E=5e-065) | complex 1 family protein / LVR family protein (117 aa)
     
  0.987
Bra038706
AT3G12260 (E=1e-060) | complex 1 family protein / LVR family protein (133 aa)
     
  0.983
Bra001444
AT3G12260 (E=5e-061) | complex 1 family protein / LVR family protein (133 aa)
     
  0.983
Bra037836
AT5G67590 (E=4e-034) FRO1 | FRO1 (FROSTBITE1); NADH dehydrogenase (ubiquinone) (94 aa)
     
    0.982
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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