STRINGSTRING
Bra004146 protein (Brassica rapa) - STRING interaction network
"Bra004146" - AT1G66110 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004146AT1G66110 (E=2e-084) | unknown protein (352 aa)    
Predicted Functional Partners:
Bra040171
AT4G17640 (E=7e-121) CKB2 | CKB2; protein kinase CK2 regulator ; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (281 aa)
           
  0.406
Bra039942
AT2G23070 (E=8e-197) | casein kinase II alpha chain, putative (420 aa)
           
  0.406
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (14%) [HD]