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Bra004219 protein (Brassica rapa) - STRING interaction network
"Bra004219" - AT2G18330 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Bra004219AT2G18330 (E=6e-057) | AAA-type ATPase family protein (278 aa)    
Predicted Functional Partners:
Bra031166
AT2G21160 (E=3e-101) | translocon-associated protein alpha (TRAP alpha) family protein (258 aa)
       
      0.508
Bra030317
AT2G21160 (E=1e-078) | translocon-associated protein alpha (TRAP alpha) family protein (256 aa)
       
      0.508
Bra001982
AT2G16595 (E=3e-090) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; EXPRESSED IN- 20 plant structures; EXPRESSED DURING- 13 growth stages; BEST Arabidopsis thaliana protein match is- translocon-associated protein alpha (TRAP alpha) family protein (TAIR-AT2G21160.1); Has 191 Blast hits to 191 proteins in 71 species- Archae - 0; Bacteria - 0; Metazoa - 121; Fungi - 18; Plants - 38; Viruses - 0; Other Eukaryotes - 14 (source- NCBI BLink). (256 aa)
       
      0.508
Bra039089
AT3G27240 (E=8e-151) | cytochrome c1, putative (307 aa)
     
      0.497
Bra032991
AT3G27240 (E=1e-144) | cytochrome c1, putative (307 aa)
     
      0.497
Bra025544
AT5G40810 (E=6e-032) | cytochrome c1, putative (82 aa)
     
      0.497
Bra025260
AT3G27240 (E=9e-141) | cytochrome c1, putative (304 aa)
     
      0.497
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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