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Bra004334 protein (Brassica rapa) - STRING interaction network
"Bra004334" - AT1G68740 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004334AT1G68740 (E=3e-207) | EXS family protein / ERD1/XPR1/SYG1 family protein (770 aa)    
Predicted Functional Partners:
Bra021874
AT2G33770 (E=7e-223) UBC24, ATUBC24, PHO2 | PHO2 (PHOSPHATE 2); ubiquitin-protein ligase (865 aa)
       
 
  0.753
Bra031553
AT1G07110 (E=0.0) F2KP, ATF2KP, FKFBP | F2KP (FRUCTOSE-2,6-BISPHOSPHATASE); fructose-2,6-bisphosphate 2-phosphatase (748 aa)
           
  0.461
Bra036635
AT1G63010 (E=0.0) | SPX (SYG1/Pho81/XPR1) domain-containing protein (702 aa)
           
  0.459
Bra034426
AT4G22990 (E=2e-220) | SPX (SYG1/Pho81/XPR1) domain-containing protein (676 aa)
           
  0.459
Bra027004
AT1G63010 (E=0.0) | SPX (SYG1/Pho81/XPR1) domain-containing protein (697 aa)
           
  0.459
Bra014869
AT4G11810 (E=0.0) | SPX (SYG1/Pho81/XPR1) domain-containing protein (697 aa)
           
  0.459
Bra013668
AT4G22990 (E=0.0) | SPX (SYG1/Pho81/XPR1) domain-containing protein (700 aa)
           
  0.459
Bra016446
AT1G20860 (E=6e-251) | phosphate transporter family protein (542 aa)
           
  0.412
Bra025212
AT3G26570 (E=2e-276) PHT2;1, ORF02 | PHT2;1 (PHOSPHATE TRANSPORTER 2;1); low affinity phosphate transmembrane transporter ; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport (585 aa)
           
  0.408
Bra040324
AT2G45130 (E=2e-104) ATSPX3, SPX3 | SPX3 (SPX DOMAIN GENE 3) (247 aa)
           
  0.406
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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