STRINGSTRING
Bra004371 protein (Brassica rapa) - STRING interaction network
"Bra004371" - AT1G69320 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004371AT1G69320 (E=3e-035) CLE10 | CLE10 (CLAVATA3/ESR-RELATED 10); protein binding / receptor binding (110 aa)    
Predicted Functional Partners:
Bra032484
AT1G05065 (E=2e-024) CLE20 | CLE20 (CLAVATA3/ESR-RELATED 20); protein binding / receptor binding (76 aa)
           
  0.477
Bra016015
AT1G73165 (E=2e-028) CLE1 | CLE1 (CLAVATA3/ESR-RELATED 1); protein binding / receptor binding (73 aa)
           
  0.477
Bra015385
AT1G05065 (E=2e-026) CLE20 | CLE20 (CLAVATA3/ESR-RELATED 20); protein binding / receptor binding (77 aa)
           
  0.477
Bra023385
AT5G12990 (E=4e-021) CLE40 | CLE40 (CLAVATA3/ESR-RELATED 40); protein binding / receptor binding (84 aa)
           
  0.453
Bra015950
AT1G73965 (E=3e-028) CLE13 | CLE13 (CLAVATA3/ESR-RELATED 13); protein binding / receptor binding (105 aa)
           
  0.453
Bra008865
AT5G12990 (E=1e-020) CLE40 | CLE40 (CLAVATA3/ESR-RELATED 40); protein binding / receptor binding (82 aa)
           
  0.453
Bra007891
AT1G69970 (E=3e-036) CLE26 | CLE26 (CLAVATA3/ESR-RELATED 26); protein binding / receptor binding (104 aa)
           
  0.418
Bra007868
AT1G69588 (E=7e-039) CLE45 | CLE45 (CLAVATA3/ESR-RELATED 45) (124 aa)
           
  0.418
Bra003992
AT1G69588 (E=2e-040) CLE45 | CLE45 (CLAVATA3/ESR-RELATED 45) (123 aa)
           
  0.418
Bra038351
AT1G68795 (E=8e-031) CLE12 | CLE12 (CLAVATA3/ESR-RELATED 12); protein binding / receptor binding (114 aa)
           
  0.416
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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