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Bra004409 protein (Brassica rapa) - STRING interaction network
"Bra004409" - AT2G48150 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004409AT2G48150 (E=6e-090) ATGPX4 | ATGPX4 (GLUTATHIONE PEROXIDASE 4); glutathione peroxidase (170 aa)    
Predicted Functional Partners:
Bra036101
AT5G27380 (E=1e-113) GSH2, GSHB | GSH2 (GLUTATHIONE SYNTHETASE 2); glutathione synthase (458 aa)
         
  0.943
Bra009967
AT5G27380 (E=1e-118) GSH2, GSHB | GSH2 (GLUTATHIONE SYNTHETASE 2); glutathione synthase (463 aa)
         
  0.943
Bra028491
AT5G41210 (E=4e-114) ATGSTT1, GST10, GSTU12 | ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1); glutathione transferase (241 aa)
     
 
  0.943
Bra025512
AT5G41210 (E=8e-116) ATGSTT1, GST10, GSTU12 | ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1); glutathione transferase (246 aa)
     
 
  0.943
Bra022815
AT2G30860 (E=6e-113) ATGSTF9, GLUTTR, ATGSTF7 | ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9); copper ion binding / glutathione binding / glutathione peroxidase/ glutathione transferase (215 aa)
     
 
  0.943
Bra021673
AT2G30860 (E=9e-112) ATGSTF9, GLUTTR, ATGSTF7 | ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9); copper ion binding / glutathione binding / glutathione peroxidase/ glutathione transferase (215 aa)
     
 
  0.943
Bra014394
AT3G62760 (E=8e-116) ATGSTF13 | ATGSTF13; glutathione transferase (219 aa)
     
 
  0.941
Bra004639
AT2G41680 (E=7e-262) NTRC | NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C); thioredoxin-disulfide reductase (521 aa)
   
  0.922
Bra000234
AT2G41680 (E=3e-246) NTRC | NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C); thioredoxin-disulfide reductase (511 aa)
   
  0.922
Bra032010
AT3G03190 (E=1e-089) ATGSTF11, ATGSTF6 | ATGSTF11 (GLUTATHIONE S-TRANSFERASE F11); glutathione transferase (210 aa)
     
 
  0.907
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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