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Bra004531 protein (Brassica rapa) - STRING interaction network
"Bra004531" - AT2G46520 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004531AT2G46520 (E=0.0) | cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative (971 aa)    
Predicted Functional Partners:
Bra020079
AT5G19990 (E=6e-228) RPT6A, ATSUG1 | RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A); ATPase (721 aa)
     
 
  0.949
Bra035562
AT5G55190 (E=9e-121) RAN3, ATRAN3 | RAN3 (RAN GTPASE 3); GTP binding / GTPase/ protein binding ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
     
 
  0.948
Bra006530
AT5G20010 (E=2e-118) RAN-1, RAN1, ATRAN1 | RAN-1; GTP binding / GTPase/ protein binding ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
     
 
  0.948
Bra002926
AT5G55190 (E=4e-119) RAN3, ATRAN3 | RAN3 (RAN GTPASE 3); GTP binding / GTPase/ protein binding ; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
     
 
  0.948
Bra039416
AT3G05720 (E=1e-182) IMPA-7 | IMPA-7 (IMPORTIN ALPHA ISOFORM 7); binding / protein transporter (499 aa)
     
 
  0.946
Bra038043
AT4G16143 (E=3e-276) IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2); binding / protein transporter (534 aa)
     
 
  0.946
Bra033534
AT4G16143 (E=8e-283) IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2); binding / protein transporter (530 aa)
     
 
  0.946
Bra033342
AT1G02690 (E=3e-203) IMPA-6 | IMPA-6 (IMPORTIN ALPHA ISOFORM 6); binding / protein transporter (521 aa)
     
 
  0.946
Bra030771
AT1G09270 (E=3e-097) IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4); binding / protein transporter (435 aa)
     
 
  0.946
Bra030765
AT1G09270 (E=5e-231) IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4); binding / protein transporter (754 aa)
     
 
  0.946
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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