STRINGSTRING
Bra004573 protein (Brassica rapa) - STRING interaction network
"Bra004573" - AT2G40475 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004573AT2G40475 (E=7e-041) | unknown protein (194 aa)    
Predicted Functional Partners:
Bra016457
AT1G20650 (E=5e-197) | ATP binding / protein kinase/ protein serine/threonine kinase (377 aa)
           
  0.541
Bra009567
AT5G47580 (E=0.0) | unknown protein (699 aa)
           
  0.477
Bra012672
AT4G17250 (E=0.0) | unknown protein (742 aa)
           
  0.448
Bra016207
AT1G70520 (E=4e-310) | protein kinase family protein (644 aa)
           
  0.406
Bra010193
AT1G33060 (E=4e-228) ANAC014 | no apical meristem (NAM) family protein (636 aa)
           
  0.406
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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