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Bra004639 protein (Brassica rapa) - STRING interaction network
"Bra004639" - AT2G41680 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004639AT2G41680 (E=7e-262) NTRC | NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C); thioredoxin-disulfide reductase (521 aa)    
Predicted Functional Partners:
Bra000234
AT2G41680 (E=3e-246) NTRC | NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C); thioredoxin-disulfide reductase (511 aa)
 
0.998
Bra038667
AT3G11630 (E=3e-043) | 2-cys peroxiredoxin, chloroplast (BAS1) (225 aa)
   
  0.997
Bra034824
AT3G11630 (E=7e-113) | 2-cys peroxiredoxin, chloroplast (BAS1) (261 aa)
   
  0.997
Bra009181
AT5G06290 (E=1e-118) 2-Cys Prx B | 2-Cys Prx B (2-Cysteine peroxiredoxin B); antioxidant/ peroxiredoxin (269 aa)
   
  0.997
Bra001415
AT3G11630 (E=8e-106) | 2-cys peroxiredoxin, chloroplast (BAS1) (307 aa)
   
  0.997
Bra029067
AT5G53460 (E=0.0) GLT1 | GLT1; glutamate synthase (NADH) (2199 aa)
   
  0.997
Bra038102
AT1G48130 (E=7e-115) ATPER1 | ATPER1; antioxidant/ thioredoxin peroxidase (216 aa)
   
  0.994
Bra032241
AT1G48130 (E=1e-091) ATPER1 | ATPER1; antioxidant/ thioredoxin peroxidase (231 aa)
   
  0.994
GR1
AT3G24170 (E=3e-234) ATGR1 | ATGR1 (glutathione-disulfide reductase); FAD binding / NADP or NADPH binding / glutathione-disulfide reductase/ oxidoreductase ; Maintains high levels of reduced glutathione in the cytosol (486 aa)
   
  0.994
Bra014801
AT3G54660 (E=5e-268) GR, EMB2360, ATGR2 | GR (GLUTATHIONE REDUCTASE); ATP binding / glutathione-disulfide reductase (615 aa)
   
  0.994
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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