STRINGSTRING
Bra004675 protein (Brassica rapa) - STRING interaction network
"Bra004675" - AT2G42210 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004675AT2G42210 (E=7e-082) ATOEP16-3, OEP16-3 | mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (160 aa)    
Predicted Functional Partners:
Bra016036
AT1G72750 (E=1e-059) ATTIM23-2 | ATTIM23-2; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (191 aa)
     
  0.904
Bra008046
AT1G72750 (E=3e-072) ATTIM23-2 | ATTIM23-2; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter (188 aa)
     
  0.904
Bra025966
AT1G17530 (E=4e-056) ATTIM23-1 | ATTIM23-1 (TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 23); P-P-bond-hydrolysis-driven protein transmembrane transporter (184 aa)
     
  0.891
Bra016597
AT1G17530 (E=1e-047) ATTIM23-1 | ATTIM23-1 (TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 23); P-P-bond-hydrolysis-driven protein transmembrane transporter (185 aa)
     
  0.891
Bra036674
AT2G36070 (E=1e-099) ATTIM44-2 | ATTIM44-2; protein-transmembrane transporting ATPase (413 aa)
     
  0.880
Bra036478
AT2G36070 (E=2e-173) ATTIM44-2 | ATTIM44-2; protein-transmembrane transporting ATPase (462 aa)
     
  0.880
Bra039986
AT2G29530 (E=2e-040) TIM10 | mitochondrial import inner membrane translocase (TIM10) (85 aa)
     
  0.874
Bra018381
AT2G29530 (E=1e-035) TIM10 | mitochondrial import inner membrane translocase (TIM10) (120 aa)
     
  0.874
Bra027370
AT3G14150 (E=2e-166) | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative (1001 aa)
       
  0.857
Bra003766
AT1G61570 (E=7e-020) TIM13 | TIM13 (TRANSLOCASE OF THE INNER MITOCHONDRIAL MEMBRANE 13); P-P-bond-hydrolysis-driven protein transmembrane transporter (88 aa)
     
  0.852
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (14%) [HD]