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Bra004721 protein (Brassica rapa) - STRING interaction network
"Bra004721" - AT2G42750 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004721AT2G42750 (E=1e-153) | DNAJ heat shock N-terminal domain-containing protein (342 aa)    
Predicted Functional Partners:
Bra025610
AT2G04700 (E=2e-076) | ferredoxin thioredoxin reductase catalytic beta chain family protein ; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin (143 aa)
       
      0.902
Bra038602
AT5G63030 (E=3e-061) | glutaredoxin, putative (120 aa)
       
 
  0.535
Bra038076
AT4G15680 (E=7e-049) | glutaredoxin family protein (101 aa)
       
 
  0.535
Bra038075
AT4G15680 (E=6e-050) | glutaredoxin family protein (102 aa)
       
 
  0.535
Bra037174
AT1G77370 (E=6e-049) | glutaredoxin, putative (134 aa)
       
 
  0.535
Bra037028
AT4G33040 (E=2e-056) | glutaredoxin family protein (141 aa)
       
 
  0.535
Bra036458
AT2G20270 (E=2e-035) | glutaredoxin family protein (167 aa)
       
 
  0.535
Bra035868
AT5G63030 (E=5e-050) | glutaredoxin, putative (116 aa)
       
 
  0.535
Bra035867
AT5G63030 (E=4e-064) | glutaredoxin, putative (125 aa)
       
 
  0.535
Bra034545
AT4G33040 (E=2e-051) | glutaredoxin family protein (144 aa)
       
 
  0.535
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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