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Bra004741 protein (Brassica rapa) - STRING interaction network
"Bra004741" - AT2G43070 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004741AT2G43070 (E=3e-257) | protease-associated (PA) domain-containing protein (541 aa)    
Predicted Functional Partners:
Bra023033
AT2G35840 (E=2e-221) | sucrose-phosphatase 1 (SPP1) (424 aa)
           
  0.514
Bra017287
AT2G35840 (E=7e-230) | sucrose-phosphatase 1 (SPP1) (422 aa)
           
  0.514
Bra017402
AT2G03120 (E=1e-041) ATSPP | ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE); aspartic-type endopeptidase (157 aa)
           
  0.487
Bra018148
AT3G47440 (E=9e-131) TIP5;1 | TIP5;1 (tonoplast intrinsic protein 5;1); urea transmembrane transporter/ water channel (255 aa)
     
   
  0.409
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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