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Bra004742 protein (Brassica rapa) - STRING interaction network
"Bra004742" - AT2G43080 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Bra004742AT2G43080 (E=4e-155) AT-P4H-1 | AT-P4H-1 (A. THALIANA P4H ISOFORM 1); oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors / procollagen-proline 4-dioxygen (285 aa)    
Predicted Functional Partners:
Bra033235
AT1G01760 (E=2e-157) | RNA binding / adenosine deaminase (393 aa)
           
  0.477
Bra025734
AT1G19360 (E=5e-215) | LOCATED IN- endoplasmic reticulum; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Reticulon (InterPro-IPR003388); BEST Arabidopsis thaliana protein match is- RRA2 (REDUCED RESIDUAL ARABINOSE 2) (TAIR-AT1G75110.1); Has 165 Blast hits to 162 proteins in 14 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 13 (source- NCBI BLink). (423 aa)
           
  0.473
Bra017310
AT2G35610 (E=0.0) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- Golgi apparatus; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Reticulon (InterPro-IPR003388); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G70630.1); Has 210 Blast hits to 209 proteins in 24 species- Archae - 0; Bacteria - 6; Metazoa - 3; Fungi - 0; Plants - 175; Viruses - 0; Other Eukaryotes - 26 (source- NCBI BLink). (640 aa)
           
  0.414
Bra005325
AT2G35610 (E=2e-306) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- Golgi apparatus; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Reticulon (InterPro-IPR003388); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G70630.1); Has 210 Blast hits to 209 proteins in 24 species- Archae - 0; Bacteria - 6; Metazoa - 3; Fungi - 0; Plants - 175; Viruses - 0; Other Eukaryotes - 26 (source- NCBI BLink). (632 aa)
           
  0.414
Bra040008
AT1G52260 (E=1e-021) ATPDIL1-5, ATPDI3, PDI3 | ATPDIL1-5 (PDI-LIKE 1-5); protein disulfide isomerase (136 aa)
       
  0.413
Bra038284
AT1G52260 (E=2e-017) ATPDIL1-5, ATPDI3, PDI3 | ATPDIL1-5 (PDI-LIKE 1-5); protein disulfide isomerase (126 aa)
       
  0.413
Bra034408
AT1G35620 (E=2e-215) ATPDIL5-2, ATPDI8, PDI8 | ATPDIL5-2 (PDI-LIKE 5-2); protein disulfide isomerase (435 aa)
       
  0.413
Bra020239
AT5G60640 (E=9e-238) ATPDIL1-4, PDI2, ATPDI2 | ATPDIL1-4 (PDI-LIKE 1-4); protein disulfide isomerase (588 aa)
       
  0.413
Bra018958
AT1G52260 (E=2e-231) ATPDIL1-5, ATPDI3, PDI3 | ATPDIL1-5 (PDI-LIKE 1-5); protein disulfide isomerase (529 aa)
       
  0.413
Bra017948
AT1G21750 (E=2e-232) ATPDIL1-1, ATPDI5, PDI5 | ATPDIL1-1 (PDI-LIKE 1-1); protein disulfide isomerase (498 aa)
       
  0.413
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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