STRINGSTRING
Bra004763 protein (Brassica rapa) - STRING interaction network
"Bra004763" - AT2G43430 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004763AT2G43430 (E=1e-156) GLX2-1 | GLX2-1 (GLYOXALASE 2-1); hydroxyacylglutathione hydrolase (286 aa)    
Predicted Functional Partners:
Bra035556
AT5G55130 (E=4e-240) CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5); Mo-molybdopterin cofactor sulfurase ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thi [...] (470 aa)
   
 
  0.803
Bra002930
AT5G55130 (E=3e-242) CNX5, SIR1 | CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5); Mo-molybdopterin cofactor sulfurase ; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thi [...] (466 aa)
   
 
  0.803
Bra016811
AT1G11840 (E=2e-155) ATGLX1 | ATGLX1 (GLYOXALASE I HOMOLOG); lactoylglutathione lyase/ metal ion binding ; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione (283 aa)
   
 
  0.793
Bra019830
AT1G11790 (E=3e-196) ADT1 | ADT1 (arogenate dehydratase 1); arogenate dehydratase/ prephenate dehydratase ; The glycine cleavage system catalyzes the degradation of glycine (1130 aa)
   
 
  0.750
Bra004214
AT1G67280 (E=3e-172) | lactoylglutathione lyase, putative / glyoxalase I, putative (341 aa)
   
 
  0.654
Bra020036
AT5G19370 (E=2e-062) | rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein (301 aa)
     
  0.613
Bra030931
AT1G53580 (E=9e-087) GLX2-3, ETHE1, GLY3 | GLY3 (GLYOXALASE II 3); hydrolase/ hydroxyacylglutathione hydrolase (242 aa)
   
     
  0.598
Bra040594
AT3G02720 (E=5e-217) | DJ-1 family protein / protease-related (388 aa)
       
  0.576
Bra039666
AT1G53280 (E=3e-209) | DJ-1 family protein (393 aa)
       
  0.576
Bra033480
AT3G14990 (E=1e-201) | 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative (391 aa)
       
  0.576
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (5%) [HD]