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Bra004781 protein (Brassica rapa) - STRING interaction network
"Bra004781" - AT2G43750 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004781AT2G43750 (E=1e-187) OASB, ACS1, CPACS1, ATCS-B | OASB (O-ACETYLSERINE (THIOL) LYASE B); cysteine synthase (396 aa)    
Predicted Functional Partners:
Bra034705
AT3G13110 (E=8e-178) ATSERAT2;2, SAT-1, SAT-A, SAT3, SAT-M | ATSERAT2;2 (SERINE ACETYLTRANSFERASE 2;2); serine O-acetyltransferase (393 aa)
   
  0.995
Bra006857
AT5G56760 (E=4e-137) ATSERAT1;1, SAT5, SAT-52 | ATSERAT1;1 (ARABIDOPSIS THALIANA SERINE ACETYLTRANSFERASE 1;1); serine O-acetyltransferase (309 aa)
   
  0.987
Bra002793
AT5G56760 (E=7e-128) ATSERAT1;1, SAT5, SAT-52 | ATSERAT1;1 (ARABIDOPSIS THALIANA SERINE ACETYLTRANSFERASE 1;1); serine O-acetyltransferase (308 aa)
   
  0.987
Bra024500
AT2G17640 (E=5e-159) ATSERAT3;1, SAT-106 | ATSERAT3;1; acetyltransferase/ serine O-acetyltransferase (318 aa)
   
  0.986
Bra039144
AT3G01120 (E=6e-221) MTO1, CGS, ATCYS1, CGS1 | MTO1 (METHIONINE OVERACCUMULATION 1); cystathionine gamma-synthase (530 aa)
   
  0.972
Bra001020
AT3G01120 (E=4e-223) MTO1, CGS, ATCYS1, CGS1 | MTO1 (METHIONINE OVERACCUMULATION 1); cystathionine gamma-synthase (545 aa)
   
  0.972
Bra014648
AT3G57050 (E=9e-221) CBL | CBL (cystathionine beta-lyase); cystathionine beta-lyase (465 aa)
   
  0.971
Bra007296
AT3G57050 (E=7e-195) CBL | CBL (cystathionine beta-lyase); cystathionine beta-lyase (403 aa)
   
  0.971
Bra035101
AT1G79230 (E=3e-187) ST1, ATMST1, MST1, ATRDH1, STR1 | MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1); 3-mercaptopyruvate sulfurtransferase/ sulfurtransferase/ thiosulfate sulfurtransferase (375 aa)
   
 
  0.956
Bra003617
AT1G79230 (E=1e-189) ST1, ATMST1, MST1, ATRDH1, STR1 | MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1); 3-mercaptopyruvate sulfurtransferase/ sulfurtransferase/ thiosulfate sulfurtransferase (379 aa)
   
 
  0.956
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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