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Bra004786 protein (Brassica rapa) - STRING interaction network
"Bra004786" - AT2G43800 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004786AT2G43800 (E=5e-200) | formin homology 2 domain-containing protein / FH2 domain-containing protein (857 aa)    
Predicted Functional Partners:
Bra029067
AT5G53460 (E=0.0) GLT1 | GLT1; glutamate synthase (NADH) (2199 aa)
     
        0.746
Bra016948
AT2G41220 (E=0.0) GLU2 | GLU2 (GLUTAMATE SYNTHASE 2); glutamate synthase (ferredoxin) (1626 aa)
     
        0.722
Bra009483
AT5G04140 (E=0.0) GLU1, GLS1, GLUS, FD-GOGAT | GLU1 (GLUTAMATE SYNTHASE 1); glutamate synthase (ferredoxin) (1620 aa)
     
        0.722
Bra000220
AT2G41220 (E=0.0) GLU2 | GLU2 (GLUTAMATE SYNTHASE 2); glutamate synthase (ferredoxin) (1586 aa)
     
        0.722
Bra039019
AT2G19770 (E=1e-063) PRF5 | PRF5 (PROFILIN5); actin binding / actin monomer binding ; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (134 aa)
       
  0.696
Bra039018
AT2G19760 (E=1e-066) PFN1, PRF1 | PRF1 (PROFILIN 1); actin binding ; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (131 aa)
       
  0.696
Bra036707
AT2G19760 (E=1e-066) PFN1, PRF1 | PRF1 (PROFILIN 1); actin binding ; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (131 aa)
       
  0.696
Bra036705
AT2G19770 (E=1e-063) PRF5 | PRF5 (PROFILIN5); actin binding / actin monomer binding ; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (134 aa)
       
  0.696
Bra031101
AT2G19770 (E=1e-061) PRF5 | PRF5 (PROFILIN5); actin binding / actin monomer binding ; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (134 aa)
       
  0.696
Bra031097
AT2G19760 (E=2e-066) PFN1, PRF1 | PRF1 (PROFILIN 1); actin binding ; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations (131 aa)
       
  0.696
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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