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Bra004796 protein (Brassica rapa) - STRING interaction network
"Bra004796" - AT2G43980 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004796AT2G43980 (E=9e-243) AtITPK4 | AtITPK4 (inositol 1,3,4-trisphosphate 5/6-kinase 4); ATP binding / catalytic/ inositol tetrakisphosphate 1-kinase/ inositol-1,3,4-trisphosphate 5/6-kinase/ magnesium ion binding (488 aa)    
Predicted Functional Partners:
Bra027458
AT5G42810 (E=3e-198) ATIPK1 | ATIPK1 (Inositol-pentakisphosphate 2-kinase 1); inositol pentakisphosphate 2-kinase/ inositol tetrakisphosphate 2-kinase (443 aa)
         
  0.901
Bra016388
AT1G59312 (E=1e-169) | ATP binding / inositol pentakisphosphate 2-kinase (583 aa)
         
  0.882
Bra008597
AT5G16760 (E=6e-158) | inositol 1,3,4-trisphosphate 5/6-kinase (409 aa)
         
0.799
Bra006368
AT5G16760 (E=7e-148) | inositol 1,3,4-trisphosphate 5/6-kinase ; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3 (322 aa)
         
0.797
Bra031686
AT1G09870 (E=5e-239) | histidine acid phosphatase family protein (478 aa)
     
 
    0.754
Bra019980
AT1G09870 (E=8e-247) | histidine acid phosphatase family protein (483 aa)
     
 
    0.754
Bra034582
AT4G33770 (E=1e-145) | inositol 1,3,4-trisphosphate 5/6-kinase family protein (769 aa)
         
0.681
Bra013122
AT4G33770 (E=4e-130) | inositol 1,3,4-trisphosphate 5/6-kinase family protein ; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3 (358 aa)
         
0.679
Bra011468
AT4G33770 (E=2e-180) | inositol 1,3,4-trisphosphate 5/6-kinase family protein ; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3 (386 aa)
         
0.653
Bra036978
AT4G33770 (E=2e-180) | inositol 1,3,4-trisphosphate 5/6-kinase family protein ; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3 (385 aa)
         
0.651
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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