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Bra004835 protein (Brassica rapa) - STRING interaction network
"Bra004835" - AT2G44450 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004835AT2G44450 (E=9e-265) BGLU15 | BGLU15 (BETA GLUCOSIDASE 15); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds (506 aa)    
Predicted Functional Partners:
Bra035407
AT1G68560 (E=0.0) ATXYL1, XYL1 | XYL1 (ALPHA-XYLOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase (927 aa)
       
  0.908
Bra006111
AT5G11720 (E=0.0) | alpha-glucosidase 1 (AGLU1) (891 aa)
       
  0.908
Bra004319
AT1G68560 (E=0.0) ATXYL1, XYL1 | XYL1 (ALPHA-XYLOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase (926 aa)
       
  0.908
Bra004031
AT1G68560 (E=0.0) ATXYL1, XYL1 | XYL1 (ALPHA-XYLOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase (924 aa)
       
  0.908
Bra036653
AT1G62660 (E=0.0) | beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar (655 aa)
         
  0.903
Bra033419
AT3G52600 (E=3e-314) AtcwINV2 | AtcwINV2 (Arabidopsis thaliana cell wall invertase 2); hydrolase, hydrolyzing O-glycosyl compounds (592 aa)
         
  0.903
Bra027397
AT3G13790 (E=0.0) ATCWINV1, ATBFRUCT1 | ATBFRUCT1; beta-fructofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds (580 aa)
         
  0.903
Bra027030
AT1G62660 (E=0.0) | beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar (654 aa)
         
  0.903
Bra026984
AT1G12240 (E=6e-296) ATBETAFRUCT4, VAC-INV | ATBETAFRUCT4; beta-fructofuranosidase/ hydrolase, hydrolyzing O-glycosyl compounds (690 aa)
         
  0.903
Bra023053
AT2G36190 (E=7e-306) AtcwINV4 | AtcwINV4 (Arabidopsis thaliana cell wall invertase 4); hydrolase, hydrolyzing O-glycosyl compounds (587 aa)
         
  0.903
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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