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Bra004853 protein (Brassica rapa) - STRING interaction network
"Bra004853" - AT2G44650 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004853AT2G44650 (E=6e-054) CHL-CPN10, CPN10 | CHL-CPN10 (CHLOROPLAST CHAPERONIN 10); chaperone binding (139 aa)    
Predicted Functional Partners:
Bra034383
AT2G28000 (E=2e-273) CPN60A, CH-CPN60A, SLP | CPN60A (CHAPERONIN-60ALPHA); ATP binding / protein binding (585 aa)
   
 
  0.996
Bra030858
AT1G55490 (E=1e-307) CPN60B, LEN1 | CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding (689 aa)
   
 
  0.996
Bra028922
AT5G56500 (E=1e-301) | ATP binding / protein binding (591 aa)
   
 
  0.996
Bra027431
AT3G13470 (E=8e-117) | chaperonin, putative (519 aa)
   
 
  0.996
Bra023694
AT5G18820 (E=2e-288) EMB3007 | EMB3007 (embryo defective 3007); ATP binding / protein binding (578 aa)
   
 
  0.996
Bra022931
AT2G33210 (E=2e-156) HSP60-2 | HSP60-2 (HEAT SHOCK PROTEIN 60-2); ATP binding (557 aa)
   
 
  0.996
Bra021836
AT2G33210 (E=1e-086) HSP60-2 | HSP60-2 (HEAT SHOCK PROTEIN 60-2); ATP binding (447 aa)
   
 
  0.996
Bra019093
AT5G56500 (E=4e-029) | ATP binding / protein binding (239 aa)
   
 
  0.996
Bra017550
AT5G56500 (E=1e-035) | ATP binding / protein binding (209 aa)
   
 
  0.996
Bra012462
AT1G26230 (E=1e-301) | chaperonin, putative (607 aa)
   
 
  0.996
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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