STRINGSTRING
Bra004869 protein (Brassica rapa) - STRING interaction network
"Bra004869" - AT2G44810 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004869AT2G44810 (E=2e-196) DAD1 | DAD1 (DEFECTIVE ANTHER DEHISCENCE 1); phospholipase A1/ triacylglycerol lipase (446 aa)    
Predicted Functional Partners:
Bra004060
AT3G45140 (E=0.0) LOX2, ATLOX2 | LOX2 (LIPOXYGENASE 2); lipoxygenase ; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (899 aa)
         
  0.602
Bra004059
AT3G45140 (E=0.0) LOX2, ATLOX2 | LOX2 (LIPOXYGENASE 2); lipoxygenase ; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (866 aa)
         
  0.602
Bra004058
AT3G45140 (E=0.0) LOX2, ATLOX2 | LOX2 (LIPOXYGENASE 2); lipoxygenase ; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (1058 aa)
         
  0.602
Bra004057
AT3G45140 (E=0.0) LOX2, ATLOX2 | LOX2 (LIPOXYGENASE 2); lipoxygenase ; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (891 aa)
         
  0.602
Bra003526
AT3G45140 (E=0.0) LOX2, ATLOX2 | LOX2 (LIPOXYGENASE 2); lipoxygenase ; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (904 aa)
         
  0.602
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (7%) [ZH]