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Bra004914 protein (Brassica rapa) - STRING interaction network
"Bra004914" - AT2G45460 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004914AT2G45460 (E=0.0) | forkhead-associated domain-containing protein / FHA domain-containing protein (863 aa)    
Predicted Functional Partners:
Bra040972
AT1G61610 (E=0.0) | S-locus lectin protein kinase family protein (1673 aa)
           
  0.426
Bra040544
AT1G61610 (E=0.0) | S-locus lectin protein kinase family protein (843 aa)
           
  0.426
Bra031766
AT1G11330 (E=0.0) | S-locus lectin protein kinase family protein (1603 aa)
           
  0.426
Bra019866
AT1G11330 (E=0.0) | S-locus lectin protein kinase family protein (831 aa)
           
  0.426
Bra019864
AT1G11330 (E=0.0) | S-locus lectin protein kinase family protein (840 aa)
           
  0.426
Bra019862
AT1G11350 (E=0.0) CBRLK1, SD1-13, RKS2 | SD1-13 (S-DOMAIN-1 13); kinase/ protein kinase/ protein serine/threonine kinase (827 aa)
           
  0.426
Bra013523
AT4G21390 (E=0.0) B120 | B120; ATP binding / protein kinase/ protein serine/threonine kinase/ sugar binding (688 aa)
           
  0.426
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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