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Bra004983 protein (Brassica rapa) - STRING interaction network
"Bra004983" - AT2G40130 in Brassica rapa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra004983AT2G40130 (E=0.0) | heat shock protein-related (899 aa)    
Predicted Functional Partners:
Bra027370
AT3G14150 (E=2e-166) | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative (1001 aa)
   
 
  0.962
Bra038361
AT1G68660 (E=4e-079) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- protein catabolic process; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Adaptor protein ClpS, core (InterPro-IPR003769), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro-IPR014719); Has 513 Blast hits to 513 proteins in 129 species- Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 201 (source- NCBI BLink). (157 aa)
   
 
  0.951
Bra004024
AT1G68660 (E=7e-080) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- protein catabolic process; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Adaptor protein ClpS, core (InterPro-IPR003769), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro-IPR014719); Has 513 Blast hits to 513 proteins in 129 species- Archae - 0; Bacteria - 273; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 201 (source- NCBI BLink). (159 aa)
   
 
  0.951
Bra031676
AT1G09640 (E=9e-204) | elongation factor 1B-gamma, putative / eEF-1B gamma, putative (413 aa)
       
 
  0.905
Bra030790
AT1G57720 (E=6e-190) | elongation factor 1B-gamma, putative / eEF-1B gamma, putative (566 aa)
       
 
  0.905
Bra020005
AT1G09640 (E=4e-193) | elongation factor 1B-gamma, putative / eEF-1B gamma, putative (413 aa)
       
 
  0.905
Bra040063
AT3G08910 (E=2e-150) | DNAJ heat shock protein, putative (326 aa)
   
 
  0.876
Bra038379
AT1G65280 (E=5e-196) | heat shock protein binding (572 aa)
   
 
  0.876
Bra038170
AT1G56300 (E=2e-068) | DNAJ heat shock N-terminal domain-containing protein (154 aa)
   
 
  0.876
Bra037438
AT5G49060 (E=6e-124) | DNAJ heat shock N-terminal domain-containing protein (359 aa)
   
 
  0.876
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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