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Bra005112 protein (Brassica rapa) - STRING interaction network
"Bra005112" - AT2G38360 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005112AT2G38360 (E=2e-048) PRA1.B4 | PRA1.B4 (PRENYLATED RAB ACCEPTOR 1.B4) (168 aa)    
Predicted Functional Partners:
Bra040162
AT4G17530 (E=2e-108) RAB1C, ATRAB1C, ATRABD2C | ATRAB1C; GTP binding (274 aa)
       
 
  0.693
Bra038676
AT3G11730 (E=7e-109) ATFP8, ATRABD1, RABD1 | ATFP8; GTP binding / GTP-dependent protein binding / myosin XI tail binding (206 aa)
       
 
  0.693
Bra034106
AT4G17530 (E=2e-017) RAB1C, ATRAB1C, ATRABD2C | ATRAB1C; GTP binding (147 aa)
       
 
  0.693
Bra032668
AT1G02140 (E=4e-066) MEE63, MAGO, HAP1 | MAGO (MAGO NASHI); protein binding (266 aa)
       
 
  0.693
Bra024956
AT5G47200 (E=1e-111) ATRABD2B, ATRAB1A | ATRAB1A; GTP binding (202 aa)
       
 
  0.693
Bra017497
AT5G47200 (E=8e-112) ATRABD2B, ATRAB1A | ATRAB1A; GTP binding (202 aa)
       
 
  0.693
Bra017497.1-P
AT5G47200 (E=8e-112) ATRABD2B, ATRAB1A | ATRAB1A; GTP binding (202 aa)
       
 
  0.693
Bra014592
AT4G17530 (E=2e-017) RAB1C, ATRAB1C, ATRABD2C | ATRAB1C; GTP binding (140 aa)
       
 
  0.693
Bra012658
AT5G47200 (E=2e-110) ATRABD2B, ATRAB1A | ATRAB1A; GTP binding (202 aa)
       
 
  0.693
Bra004941
AT4G17530 (E=2e-015) RAB1C, ATRAB1C, ATRABD2C | ATRAB1C; GTP binding (277 aa)
       
 
  0.693
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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