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Bra005126 protein (Brassica rapa) - STRING interaction network
"Bra005126" - AT2G38280 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005126AT2G38280 (E=0.0) FAC1, ATAMPD | FAC1 (EMBRYONIC FACTOR1); AMP deaminase (841 aa)    
Predicted Functional Partners:
Bra023310
AT5G11160 (E=8e-103) APT5 | APT5 (Adenine phosphoribosyltransferase 5); adenine phosphoribosyltransferase (191 aa)
       
  0.956
Bra020201
AT1G27450 (E=4e-069) APT1, ATAPT1 | APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1); adenine phosphoribosyltransferase (198 aa)
       
  0.956
Bra010937
AT1G27450 (E=3e-094) APT1, ATAPT1 | APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1); adenine phosphoribosyltransferase (241 aa)
       
  0.956
Bra008986
AT5G11160 (E=6e-101) APT5 | APT5 (Adenine phosphoribosyltransferase 5); adenine phosphoribosyltransferase (190 aa)
       
  0.956
Bra003547
AT1G80050 (E=2e-091) APT2, ATAPT2 | APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2); adenine phosphoribosyltransferase/ phosphate transmembrane transporter (192 aa)
       
  0.956
Bra019374
AT4G22570 (E=2e-090) APT3 | APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3); adenine phosphoribosyltransferase (238 aa)
       
  0.954
Bra007342
AT3G57610 (E=3e-261) ADSS | ADSS (ADENYLOSUCCINATE SYNTHASE); adenylosuccinate synthase ; Plays an important role in the de novo pathway of purine nucleotide biosynthesis (490 aa)
   
 
  0.946
Bra034087
AT3G09820 (E=3e-185) ADK1, ATADK1 | ADK1 (adenosine kinase 1); adenosine kinase/ copper ion binding (344 aa)
       
  0.946
Bra009536
AT5G03300 (E=8e-187) ADK2 | ADK2 (ADENOSINE KINASE 2); adenosine kinase/ copper ion binding / kinase (344 aa)
       
  0.946
Bra005735
AT5G03300 (E=2e-188) ADK2 | ADK2 (ADENOSINE KINASE 2); adenosine kinase/ copper ion binding / kinase (345 aa)
       
  0.946
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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