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Bra005132 protein (Brassica rapa) - STRING interaction network
"Bra005132" - AT2G38152 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005132AT2G38152 (E=1e-147) | galactosyltransferase (396 aa)    
Predicted Functional Partners:
Bra040271
AT3G06440 (E=3e-179) | galactosyltransferase family protein (463 aa)
         
  0.542
Bra038787
AT4G21060 (E=3e-020) | galactosyltransferase family protein (85 aa)
         
  0.542
Bra024660
AT1G27120 (E=2e-288) | galactosyltransferase family protein (647 aa)
         
  0.542
Bra018103
AT5G62620 (E=1e-298) | galactosyltransferase family protein (662 aa)
         
  0.542
Bra016310
AT1G27120 (E=4e-057) | galactosyltransferase family protein (150 aa)
         
  0.542
Bra016308
AT1G27120 (E=3e-193) | galactosyltransferase family protein (505 aa)
         
  0.542
Bra015892
AT1G74800 (E=0.0) | galactosyltransferase family protein (662 aa)
         
  0.542
Bra013498
AT4G21060 (E=2e-311) | galactosyltransferase family protein (585 aa)
         
  0.542
Bra013495
AT4G21060 (E=1e-017) | galactosyltransferase family protein (96 aa)
         
  0.542
Bra012440
AT1G26810 (E=0.0) GALT1 | GALT1 (GALACTOSYLTRANSFERASE1); UDP-galactose-N-glycan beta-1,3-galactosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups (636 aa)
         
  0.542
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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