STRINGSTRING
Bra005135 protein (Brassica rapa) - STRING interaction network
"Bra005135" - AT2G38130 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005135AT2G38130 (E=7e-096) ATMAK3 | ATMAK3; N-acetyltransferase (185 aa)    
Predicted Functional Partners:
Bra019452
AT2G11000 (E=2e-228) ATMAK10, MAK10 | ATMAK10; acetyltransferase (736 aa)
       
  0.976
Bra002650
AT5G58450 (E=0.0) | binding (999 aa)
       
 
  0.949
Bra035184
AT1G80410 (E=0.0) EMB2753 | EMB2753 (EMBRYO DEFECTIVE 2753); binding (897 aa)
       
 
  0.942
Bra008474
AT1G80410 (E=0.0) EMB2753 | EMB2753 (EMBRYO DEFECTIVE 2753); binding (1274 aa)
       
 
  0.942
Bra003565
AT1G80410 (E=0.0) EMB2753 | EMB2753 (EMBRYO DEFECTIVE 2753); binding (1618 aa)
       
 
  0.942
Bra040280
AT3G06610 (E=1e-038) | DNA-binding enhancer protein-related (115 aa)
     
 
  0.756
Bra029592
AT3G06610 (E=7e-038) | DNA-binding enhancer protein-related (115 aa)
     
 
  0.756
Bra024345
AT5G65010 (E=4e-309) ASN2 | ASN2 (ASPARAGINE SYNTHETASE 2); asparagine synthase (glutamine-hydrolyzing) (565 aa)
       
  0.728
Bra019500
AT3G47340 (E=6e-311) ASN1, DIN6, AT-ASN1 | ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1); asparagine synthase (glutamine-hydrolyzing) (592 aa)
       
  0.728
Bra018160
AT3G47340 (E=0.0) ASN1, DIN6, AT-ASN1 | ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1); asparagine synthase (glutamine-hydrolyzing) (586 aa)
       
  0.728
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (8%) [HD]