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Bra005204 protein (Brassica rapa) - STRING interaction network
"Bra005204" - AT2G37330 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005204AT2G37330 (E=2e-128) ALS3 | ALS3 (ALUMINUM SENSITIVE 3) (273 aa)    
Predicted Functional Partners:
Bra004271
AT1G67940 (E=2e-127) ATNAP3 | ATNAP3; transporter (264 aa)
     
 
  0.746
Bra036750
AT1G34370 (E=2e-162) STOP1 | STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding (491 aa)
           
  0.606
Bra040971
AT1G34370 (E=1e-128) STOP1 | STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding (426 aa)
           
  0.575
Bra030446
AT1G51340 (E=1e-230) | MATE efflux family protein (517 aa)
           
  0.539
Bra014272
AT1G51340 (E=1e-212) | MATE efflux family protein (519 aa)
           
  0.539
Bra012627
AT4G17970 (E=1e-270) | unknown protein (535 aa)
           
  0.474
Bra028221
AT5G39040 (E=6e-304) ATTAP2, TAP2 | ATTAP2; ATPase, coupled to transmembrane movement of substances / transporter (641 aa)
         
  0.472
Bra040047
AT3G08040 (E=4e-189) FRD3, MAN1 | FRD3 (FERRIC REDUCTASE DEFECTIVE 3); antiporter/ transporter (528 aa)
           
  0.456
Bra029694
AT3G08040 (E=7e-189) FRD3, MAN1 | FRD3 (FERRIC REDUCTASE DEFECTIVE 3); antiporter/ transporter (536 aa)
           
  0.456
Bra001283
AT3G08040 (E=3e-196) FRD3, MAN1 | FRD3 (FERRIC REDUCTASE DEFECTIVE 3); antiporter/ transporter (529 aa)
           
  0.456
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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