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Bra005206 protein (Brassica rapa) - STRING interaction network
"Bra005206" - AT2G37290 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005206AT2G37290 (E=2e-313) | RabGAP/TBC domain-containing protein (1069 aa)    
Predicted Functional Partners:
Bra031299
AT3G21700 (E=3e-114) SGP2 | SGP2; GTP binding (286 aa)
       
  0.970
Bra023865
AT3G21700 (E=3e-099) SGP2 | SGP2; GTP binding (278 aa)
       
  0.970
Bra002953
AT5G54840 (E=3e-149) ATSGP1, SGP1 | SGP1; GTP binding (284 aa)
       
  0.970
Bra001841
AT3G21700 (E=8e-099) SGP2 | SGP2; GTP binding (282 aa)
       
  0.970
Bra006205
AT5G13530 (E=0.0) KEG | KEG (KEEP ON GOING); protein binding / protein kinase/ ubiquitin-protein ligase (1608 aa)
     
 
  0.771
Bra038371
AT4G09720 (E=3e-110) ATRABG3A | Ras-related GTP-binding protein, putative (206 aa)
       
 
  0.751
Bra037557
AT3G18820 (E=8e-102) ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B | ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F); GTP binding (182 aa)
       
 
  0.751
Bra036456
AT1G49300 (E=5e-047) ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB GTPASE HOMOLOG G3E); GTP binding (132 aa)
       
 
  0.751
Bra031220
AT2G21880 (E=2e-077) ATRAB7A, ATRABG2 | ATRAB7A; GTP binding (177 aa)
       
 
  0.751
Bra030395
AT1G52280 (E=4e-117) AtRABG3d | AtRABG3d (Arabidopsis Rab GTPase homolog G3d); GTP binding (206 aa)
       
 
  0.751
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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