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Bra005218 protein (Brassica rapa) - STRING interaction network
"Bra005218" - AT2G37090 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005218AT2G37090 (E=2e-177) IRX9 | IRX9 (IRREGULAR XYLEM 9); transferase, transferring glycosyl groups / xylosyltransferase (347 aa)    
Predicted Functional Partners:
Bra038114
AT1G53290 (E=1e-181) | galactosyltransferase family protein (348 aa)
         
  0.705
Bra034289
AT2G26100 (E=3e-159) | galactosyltransferase family protein (363 aa)
         
  0.705
Bra031357
AT1G22015 (E=1e-153) DD46 | DD46; galactosyltransferase/ transferase, transferring hexosyl groups (334 aa)
         
  0.705
Bra027291
AT3G14960 (E=6e-166) | galactosyltransferase family protein (343 aa)
         
  0.705
Bra026392
AT4G26940 (E=8e-026) | galactosyltransferase family protein (108 aa)
         
  0.705
Bra023296
AT1G32930 (E=3e-210) | galactosyltransferase family protein (391 aa)
         
  0.705
Bra022647
AT5G53340 (E=1e-165) | galactosyltransferase family protein (403 aa)
         
  0.705
Bra019835
AT1G11730 (E=1e-187) | galactosyltransferase family protein (391 aa)
         
  0.705
Bra019081
AT4G26940 (E=8e-141) | galactosyltransferase family protein (386 aa)
         
  0.705
Bra016393
AT1G22015 (E=3e-183) DD46 | DD46; galactosyltransferase/ transferase, transferring hexosyl groups (390 aa)
         
  0.705
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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