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Bra005256 protein (Brassica rapa) - STRING interaction network
"Bra005256" - AT2G36640 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005256AT2G36640 (E=2e-106) ATECP63 | ATECP63 (EMBRYONIC CELL PROTEIN 63) (399 aa)    
Predicted Functional Partners:
Bra032502
AT1G04560 (E=3e-074) | AWPM-19-like membrane family protein (183 aa)
     
   
  0.566
Bra015328
AT1G04560 (E=4e-092) | AWPM-19-like membrane family protein (185 aa)
     
   
  0.566
Bra037283
AT2G17040 (E=2e-131) anac036 | anac036 (Arabidopsis NAC domain containing protein 36); transcription factor (279 aa)
           
  0.414
Bra013034
AT2G17040 (E=3e-131) anac036 | anac036 (Arabidopsis NAC domain containing protein 36); transcription factor (281 aa)
           
  0.414
Bra002018
AT2G17040 (E=5e-123) anac036 | anac036 (Arabidopsis NAC domain containing protein 36); transcription factor (319 aa)
           
  0.414
Bra039956
AT3G22490 (E=2e-099) | late embryogenesis abundant protein, putative / LEA protein, putative (262 aa)
           
  0.407
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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