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Bra005271 protein (Brassica rapa) - STRING interaction network
"Bra005271" - AT5G48620 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005271AT5G48620 (E=3e-312) | disease resistance protein (CC-NBS-LRR class), putative (1152 aa)    
Predicted Functional Partners:
Bra037901
AT4G10040 (E=3e-032) CYTC-2 | CYTC-2 (cytochrome c-2); electron carrier/ heme binding / iron ion binding (100 aa)
       
  0.701
Bra024541
AT1G22840 (E=3e-061) CYTC-1, ATCYTC-A | CYTC-1 (CYTOCHROME C-1); electron carrier/ heme binding / iron ion binding ; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (112 aa)
       
  0.701
Bra012346
AT1G22840 (E=8e-061) CYTC-1, ATCYTC-A | CYTC-1 (CYTOCHROME C-1); electron carrier/ heme binding / iron ion binding ; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (112 aa)
       
  0.701
Bra000699
AT4G10040 (E=2e-062) CYTC-2 | CYTC-2 (cytochrome c-2); electron carrier/ heme binding / iron ion binding ; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (112 aa)
       
  0.701
Bra006730
AT5G59140 (E=1e-050) | SKP1 family protein (96 aa)
       
 
  0.627
Bra002588
AT5G59140 (E=5e-050) | SKP1 family protein (96 aa)
       
 
  0.627
Bra020408
AT5G57860 (E=2e-033) | ubiquitin family protein (152 aa)
       
 
  0.616
Bra006794
AT5G57860 (E=3e-041) | ubiquitin family protein (93 aa)
       
 
  0.616
Bra022350
AT3G18730 (E=0.0) TSK, MGO3, BRU1 | TSK (TONSOKU); protein binding (1324 aa)
     
 
  0.558
Bra037195
AT5G65930 (E=0.0) ZWI, PKCBP, KCBP | ZWI (ZWICHEL); calmodulin binding / microtubule motor (1264 aa)
     
   
  0.535
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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