STRINGSTRING
Bra005276 protein (Brassica rapa) - STRING interaction network
"Bra005276" - AT2G36350 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005276AT2G36350 (E=1e-025) | protein kinase, putative (188 aa)    
Predicted Functional Partners:
Bra037195
AT5G65930 (E=0.0) ZWI, PKCBP, KCBP | ZWI (ZWICHEL); calmodulin binding / microtubule motor (1264 aa)
       
 
  0.547
Bra031801
AT5G65930 (E=0.0) ZWI, PKCBP, KCBP | ZWI (ZWICHEL); calmodulin binding / microtubule motor (1281 aa)
       
 
  0.547
Bra034125
AT3G10540 (E=2e-256) | 3-phosphoinositide-dependent protein kinase, putative (489 aa)
       
  0.520
Bra029850
AT3G10540 (E=4e-251) | 3-phosphoinositide-dependent protein kinase, putative (481 aa)
       
  0.520
Bra009447
AT5G04510 (E=1e-247) PDK1, ATPDK1 | PDK1 (3’-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1); 3-phosphoinositide-dependent protein kinase/ kinase/ phosphoinositide binding / protein binding / protein kinase (490 aa)
       
  0.520
Bra022252
AT3G17850 (E=5e-070) | protein kinase, putative (216 aa)
       
 
  0.504
Bra022251
AT3G17850 (E=0.0) | protein kinase, putative (1281 aa)
       
 
  0.504
Bra021278
AT3G17850 (E=0.0) | protein kinase, putative (1256 aa)
       
 
  0.504
Bra018730
AT1G48490 (E=1e-200) | kinase (927 aa)
       
 
  0.504
Bra014141
AT1G48490 (E=0.0) | kinase (1213 aa)
       
 
  0.504
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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