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Bra005280 protein (Brassica rapa) - STRING interaction network
"Bra005280" - AT3G52890 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005280AT3G52890 (E=3e-235) KIPK | KIPK (KCBP-interacting protein kinase); kinase/ protein binding / protein kinase (888 aa)    
Predicted Functional Partners:
Bra037195
AT5G65930 (E=0.0) ZWI, PKCBP, KCBP | ZWI (ZWICHEL); calmodulin binding / microtubule motor (1264 aa)
       
 
  0.828
Bra028192
AT5G38560 (E=2e-223) | protein kinase family protein (669 aa)
       
 
  0.630
Bra004331
AT1G68690 (E=7e-207) | ATP binding / protein kinase/ protein serine/threonine kinase (866 aa)
       
 
  0.630
Bra007915
AT1G70460 (E=1e-229) | protein kinase, putative (674 aa)
       
 
  0.627
Bra031801
AT5G65930 (E=0.0) ZWI, PKCBP, KCBP | ZWI (ZWICHEL); calmodulin binding / microtubule motor (1281 aa)
       
 
  0.547
Bra022252
AT3G17850 (E=5e-070) | protein kinase, putative (216 aa)
       
 
  0.504
Bra009447
AT5G04510 (E=1e-247) PDK1, ATPDK1 | PDK1 (3’-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1); 3-phosphoinositide-dependent protein kinase/ kinase/ phosphoinositide binding / protein binding / protein kinase (490 aa)
       
0.491
Bra026371
AT4G27180 (E=5e-295) ATK2, KATB | ATK2 (ARABIDOPSIS THALIANA KINESIN 2); microtubule binding / microtubule motor (772 aa)
       
 
  0.445
Bra017467
AT5G47760 (E=2e-139) PGLP2, ATPGLP2, ATPK5 | ATPGLP2 (ARABIDOPSIS THALIANA 2-PHOSPHOGLYCOLATE PHOSPHATASE 2); phosphoglycolate phosphatase/ protein serine/threonine kinase (290 aa)
           
  0.440
Bra019913
AT1G10620 (E=2e-215) | protein kinase family protein (715 aa)
       
 
  0.424
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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