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Bra005287 protein (Brassica rapa) - STRING interaction network
"Bra005287" - AT2G36270 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005287AT2G36270 (E=5e-133) ABI5, GIA1 | ABI5 (ABA INSENSITIVE 5); DNA binding / transcription activator/ transcription factor (438 aa)    
Predicted Functional Partners:
Bra018800
AT1G49720 (E=4e-065) ABF1 | ABF1 (ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1); DNA binding / protein binding / transcription activator/ transcription factor (368 aa)
       
 
0.987
Bra012113
AT5G66880 (E=1e-178) SNRK2-3, SNRK2.3, SRK2I | SNRK2.3 (SUCROSE NONFERMENTING 1(SNF1)-RELATED PROTEIN KINASE 2.3); kinase/ protein kinase (357 aa)
       
  0.978
Bra012897
AT3G50500 (E=9e-184) SPK-2-2, SNRK2-2, SNRK2.2, SRK2D | SNRK2.2 (SNF1-RELATED PROTEIN KINASE 2.2); kinase/ protein kinase (361 aa)
       
  0.969
Bra006205
AT5G13530 (E=0.0) KEG | KEG (KEEP ON GOING); protein binding / protein kinase/ ubiquitin-protein ligase (1608 aa)
       
 
  0.963
Bra013248
AT3G24650 (E=7e-290) ABI3, SIS10 | ABI3 (ABA INSENSITIVE 3); DNA binding / basal transcription repressor/ transcription activator/ transcription factor (717 aa)
       
 
  0.960
Bra034407
AT1G35670 (E=7e-278) ATCDPK2, CPK11, ATCPK11 | ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2); calmodulin-dependent protein kinase/ kinase (497 aa)
       
 
  0.947
Bra011481
AT4G33950 (E=3e-191) OST1, SNRK2-6, SRK2E, SNRK2.6, P44 | OST1 (OPEN STOMATA 1); calcium-dependent protein serine/threonine kinase/ kinase/ protein kinase (362 aa)
       
  0.940
Bra034845
AT3G11410 (E=8e-152) ATPP2CA, AHG3, PP2CA | PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA); protein binding / protein serine/threonine phosphatase (399 aa)
       
 
  0.939
Bra002038
AT3G11410 (E=9e-152) ATPP2CA, AHG3, PP2CA | PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA); protein binding / protein serine/threonine phosphatase (380 aa)
       
 
  0.939
Bra029160
AT5G51760 (E=2e-176) AHG1 | AHG1 (ABA-hypersensitive germination 1); catalytic/ protein serine/threonine phosphatase (418 aa)
       
 
  0.939
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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