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Bra005305 protein (Brassica rapa) - STRING interaction network
"Bra005305" - AT2G36010 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005305AT2G36010 (E=6e-192) E2F3, ATE2FA | E2F3 (E2F TRANSCRIPTION FACTOR 3); DNA binding / transcription factor (481 aa)    
Predicted Functional Partners:
Bra009586
AT5G02470 (E=2e-129) DPA | DPA; transcription factor (290 aa)
     
  0.982
Bra005763
AT5G03415 (E=2e-129) DPB, ATDPB | DPB; protein binding / protein heterodimerization (365 aa)
     
  0.982
Bra005726
AT5G02470 (E=4e-127) DPA | DPA; transcription factor (283 aa)
     
  0.982
Bra038707
AT3G12280 (E=0.0) RBR1, RBR, RB, ATRBR1 | RBR1 (RETINOBLASTOMA-RELATED 1); transcription factor binding (1019 aa)
     
  0.982
Bra034764
AT3G12280 (E=0.0) RBR1, RBR, RB, ATRBR1 | RBR1 (RETINOBLASTOMA-RELATED 1); transcription factor binding (1016 aa)
     
  0.982
Bra001446
AT3G12280 (E=0.0) RBR1, RBR, RB, ATRBR1 | RBR1 (RETINOBLASTOMA-RELATED 1); transcription factor binding (1027 aa)
     
  0.979
Bra036771
AT1G36160 (E=0.0) ACC1, AT-ACC1, EMB22, GK, PAS3 | ACC1 (ACETYL-COENZYME A CARBOXYLASE 1); acetyl-CoA carboxylase (2233 aa)
       
      0.931
Bra018702
AT1G36180 (E=0.0) ACC2 | ACC2 (ACETYL-COA CARBOXYLASE 2); acetyl-CoA carboxylase (2310 aa)
       
      0.931
Bra036544
AT1G65550 (E=2e-209) | xanthine/uracil permease family protein (987 aa)
     
  0.915
Bra040793
AT1G47210 (E=4e-170) CYCA3;2 | cyclin family protein (363 aa)
     
  0.915
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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