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Bra005312 protein (Brassica rapa) - STRING interaction network
"Bra005312" - AT2G35710 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005312AT2G35710 (E=2e-261) | glycogenin glucosyltransferase (glycogenin)-related (494 aa)    
Predicted Functional Partners:
Bra017241
AT2G36380 (E=0.0) PDR6, ATPDR6 | PDR6; ATPase, coupled to transmembrane movement of substances (2270 aa)
     
 
  0.727
Bra035782
AT3G20440 (E=0.0) EMB2729, BE1 | alpha-amylase/ catalytic/ cation binding (896 aa)
     
 
  0.726
Bra009521
AT5G03650 (E=0.0) SBE2.2 | SBE2.2 (starch branching enzyme 2.2); 1,4-alpha-glucan branching enzyme (851 aa)
     
 
  0.726
Bra005269
AT2G36390 (E=0.0) SBE2.1, BE3 | SBE2.1 (starch branching enzyme 2.1); 1,4-alpha-glucan branching enzyme (845 aa)
     
 
  0.726
Bra014108
AT4G09020 (E=2e-037) ATISA3, ISA3 | ISA3 (ISOAMYLASE 3); alpha-amylase/ isoamylase (207 aa)
     
 
  0.723
Bra017025
AT2G40180 (E=1e-129) ATHPP2C5 | ATHPP2C5; catalytic/ protein serine/threonine phosphatase (564 aa)
     
  0.675
Bra004979
AT2G40190 (E=1e-231) | glycosyl transferase family 1 protein (463 aa)
       
  0.668
Bra000175
AT3G18150 (E=4e-080) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; CONTAINS InterPro DOMAIN/s- Cyclin-like F-box (InterPro-IPR001810), Leucine-rich repeat 2 (InterPro-IPR013101); BEST Arabidopsis thaliana protein match is- F-box family protein (TAIR-AT5G02910.1). (464 aa)
       
  0.668
Bra039502
AT5G37180 (E=0.0) SUS5, ATSUS5 | SUS5; UDP-glycosyltransferase/ sucrose synthase ; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (837 aa)
       
  0.667
Bra037432
AT5G49190 (E=0.0) SUS2, SSA, ATSUS2 | SUS2 (SUCROSE SYNTHASE 2); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups ; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (807 aa)
       
  0.667
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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