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Bra005318 protein (Brassica rapa) - STRING interaction network
"Bra005318" - AT2G35630 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005318AT2G35630 (E=0.0) MOR1, GEM1 | MOR1 (MICROTUBULE ORGANIZATION 1); microtubule binding (1984 aa)    
Predicted Functional Partners:
Bra007084
AT3G54630 (E=6e-198) | FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 11 plant structures; EXPRESSED DURING- 6 growth stages; CONTAINS InterPro DOMAIN/s- Kinetochore protein Ndc80 (InterPro-IPR005550); Has 19800 Blast hits to 12108 proteins in 845 species- Archae - 345; Bacteria - 1709; Metazoa - 11031; Fungi - 1499; Plants - 797; Viruses - 39; Other Eukaryotes - 4380 (source- NCBI BLink). (574 aa)
     
  0.968
Bra010090
AT5G62500 (E=3e-125) ATEB1B, ATEB1, EB1B | ATEB1B (END BINDING PROTEIN 1B); microtubule binding (283 aa)
       
  0.967
Bra037119
AT5G67310 (E=1e-182) CYP81G1 | CYP81G1; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding (776 aa)
       
  0.967
Bra029255
AT5G62500 (E=8e-076) ATEB1B, ATEB1, EB1B | ATEB1B (END BINDING PROTEIN 1B); microtubule binding (249 aa)
       
  0.966
Bra018120
AT3G47690 (E=5e-075) ATEB1A, EB1A, ATEB1H2 | ATEB1A; microtubule binding (290 aa)
       
  0.966
Bra012147
AT5G67270 (E=2e-109) ATEB1C, EB1C, ATEB1H1 | ATEB1C (microtubule end binding protein 1); microtubule binding (366 aa)
       
  0.966
Bra010091
AT5G62500 (E=4e-044) ATEB1B, ATEB1, EB1B | ATEB1B (END BINDING PROTEIN 1B); microtubule binding (169 aa)
       
  0.966
Bra039648
AT1G04820 (E=5e-243) TUA4 | TUA4; structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (450 aa)
       
  0.962
Bra020572
AT4G14960 (E=4e-115) TUA6 | TUA6; structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (468 aa)
       
  0.962
Bra020062
AT5G19770 (E=6e-236) TUA3 | TUA3; structural constituent of cytoskeleton ; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (450 aa)
       
  0.962
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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