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Bra005332 protein (Brassica rapa) - STRING interaction network
"Bra005332" - AT5G66450 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005332AT5G66450 (E=3e-020) | phosphatidic acid phosphatase-related / PAP2-related (78 aa)    
Predicted Functional Partners:
Bra024550
AT1G22940 (E=3e-253) TH1, TH-1, THIE | TH1 (THIAMINE REQUIRING 1); hydroxymethylpyrimidine kinase/ phosphomethylpyrimidine kinase/ thiamin-phosphate diphosphorylase (526 aa)
       
    0.847
Bra025828
AT1G20575 (E=1e-086) | dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative (204 aa)
       
  0.777
Bra012235
AT1G20575 (E=6e-134) | dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative (247 aa)
       
  0.777
Bra037623
AT3G45040 (E=4e-257) | phosphatidate cytidylyltransferase family protein (568 aa)
     
  0.766
Bra005576
AT3G45040 (E=7e-264) | phosphatidate cytidylyltransferase family protein (565 aa)
     
  0.766
Bra005029
AT2G39630 (E=6e-155) | glycosyl transferase family 2 protein (414 aa)
       
  0.755
Bra000139
AT2G39630 (E=6e-168) | glycosyl transferase family 2 protein (336 aa)
       
  0.755
Bra014644
AT3G57220 (E=7e-188) | UDP-GlcNAc-dolichol phosphate N-acetylglucosamine-1-phosphate transferase, putative (419 aa)
     
 
  0.699
Bra007312
AT3G57220 (E=2e-190) | UDP-GlcNAc-dolichol phosphate N-acetylglucosamine-1-phosphate transferase, putative (422 aa)
     
 
  0.699
Bra004624
AT2G41490 (E=8e-189) GPT | GPT (UDP-GLCNAC%3ADOLICHOL+PHOSPHATE+GLCNAC-1-P+TRANSFERASE); UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (422 aa)
     
 
  0.699
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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