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Bra005368 protein (Brassica rapa) - STRING interaction network
"Bra005368" - AT2G35110 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005368AT2G35110 (E=0.0) GRL, NAP1, NAPP | GRL (GNARLED); transcription activator (1399 aa)    
Predicted Functional Partners:
Bra006457
AT5G18410 (E=0.0) PIR, KLK, PIR121, SRA1, PIRP | PIR121; transcription activator (1273 aa)
     
  0.998
Bra030221
AT2G22640 (E=5e-029) HSPC300, BRK1 | BRK1 (BRICK1) (86 aa)
       
  0.983
Bra010847
AT1G29170 (E=7e-315) WAVE2, ATSCAR3, SCAR3 | WAVE2 (960 aa)
     
  0.963
Bra005450
AT2G34150 (E=8e-257) WAVE1 | WAVE1; actin monomer binding (888 aa)
     
  0.962
Bra013329
AT4G18600 (E=0.0) WAVE5, ATSCAR-LIKE, SCARL | WAVE5; protein binding (2291 aa)
     
  0.944
Bra032763
AT4G14147 (E=3e-057) ARPC4 | ARPC4; protein binding (141 aa)
       
  0.829
Bra038441
AT4G14145 (E=1e-046) | unknown protein (126 aa)
       
  0.781
Bra010747
AT4G14145 (E=2e-044) | unknown protein (120 aa)
       
  0.781
Bra040869
AT2G17800 (E=2e-078) ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC1; GTP binding (175 aa)
       
  0.775
Bra038892
AT2G17800 (E=9e-097) ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC1; GTP binding (197 aa)
       
  0.775
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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