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Bra005369 protein (Brassica rapa) - STRING interaction network
"Bra005369" - AT2G35100 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005369AT2G35100 (E=1e-216) ARAD1 | ARAD1 (ARABINAN DEFICIENT 1); catalytic/ transferase, transferring glycosyl groups (450 aa)    
Predicted Functional Partners:
Bra028787
AT5G04500 (E=0.0) | glycosyltransferase family protein 47 (717 aa)
         
  0.603
Bra009448
AT5G04500 (E=0.0) | glycosyltransferase family protein 47 (763 aa)
         
  0.603
Bra007194
AT3G55830 (E=5e-173) EPC1 | EPC1 (ECTOPICALLY PARTING CELLS); UDP-glucosyltransferase/ transferase, transferring glycosyl groups (330 aa)
         
  0.603
Bra007696
AT3G62720 (E=2e-256) ATXT1, XT1, XXT1 | XT1 (XYLOSYLTRANSFERASE 1); UDP-xylosyltransferase/ transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferase (456 aa)
       
 
  0.568
Bra036262
AT4G02500 (E=8e-254) ATXT2, XXT2, XT2 | XT2 (UDP-XYLOSYLTRANSFERASE 2); UDP-xylosyltransferase/ transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferase (462 aa)
       
 
  0.558
Bra018545
AT4G02500 (E=3e-250) ATXT2, XXT2, XT2 | XT2 (UDP-XYLOSYLTRANSFERASE 2); UDP-xylosyltransferase/ transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferase (462 aa)
       
 
  0.558
Bra000877
AT4G02500 (E=2e-252) ATXT2, XXT2, XT2 | XT2 (UDP-XYLOSYLTRANSFERASE 2); UDP-xylosyltransferase/ transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferase (463 aa)
       
 
  0.558
Bra007573
AT3G61130 (E=0.0) GAUT1, LGT1 | GAUT1 (GALACTURONOSYLTRANSFERASE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups (673 aa)
           
  0.541
Bra036680
AT2G20370 (E=2e-285) KAM1, MUR3 | MUR3 (MURUS 3); catalytic/ transferase, transferring glycosyl groups (599 aa)
           
  0.540
Bra015104
AT3G25140 (E=6e-297) GAUT8, QUA1 | QUA1 (QUASIMODO 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups (569 aa)
           
  0.530
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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