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Bra005380 protein (Brassica rapa) - STRING interaction network
"Bra005380" - AT2G34925 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005380AT2G34925 (E=2e-021) CLE42 | CLE42 (CLAVATA3/ESR-RELATED 42) (109 aa)    
Predicted Functional Partners:
Bra015079
AT3G24770 (E=8e-017) CLE41 | CLE41 (CLAVATA3/ESR-RELATED 41); protein binding / receptor binding (55 aa)
           
  0.606
Bra021007
AT4G18510 (E=7e-018) CLE2 | CLE2 (CLAVATA3/ESR-RELATED); protein binding / receptor binding (79 aa)
           
  0.545
Bra013319
AT4G18510 (E=1e-021) CLE2 | CLE2 (CLAVATA3/ESR-RELATED); protein binding / receptor binding (78 aa)
           
  0.545
Bra016015
AT1G73165 (E=2e-028) CLE1 | CLE1 (CLAVATA3/ESR-RELATED 1); protein binding / receptor binding (73 aa)
           
  0.541
Bra024751
AT1G25425 (E=2e-031) CLE43 | CLE43 (CLAVATA3/ESR-RELATED 43) (97 aa)
           
  0.505
Bra012476
AT1G25425 (E=7e-033) CLE43 | CLE43 (CLAVATA3/ESR-RELATED 43) (89 aa)
           
  0.505
Bra012952
AT5G61480 (E=1e-255) | leucine-rich repeat transmembrane protein kinase, putative (1016 aa)
           
  0.499
Bra033047
AT3G28455 (E=2e-017) CLE25 | CLE25 (CLAVATA3/ESR-RELATED 25); protein binding / receptor binding (103 aa)
           
  0.487
Bra023385
AT5G12990 (E=4e-021) CLE40 | CLE40 (CLAVATA3/ESR-RELATED 40); protein binding / receptor binding (84 aa)
           
  0.485
Bra008865
AT5G12990 (E=1e-020) CLE40 | CLE40 (CLAVATA3/ESR-RELATED 40); protein binding / receptor binding (82 aa)
           
  0.485
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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