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Bra005536 protein (Brassica rapa) - STRING interaction network
"Bra005536" - AT2G32990 in Brassica rapa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
Bra005536AT2G32990 (E=9e-273) AtGH9B8 | AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds (522 aa)    
Predicted Functional Partners:
Bra035561
AT5G55180 (E=1e-212) | glycosyl hydrolase family 17 protein (460 aa)
           
  0.534
Bra028988
AT5G55180 (E=5e-216) | glycosyl hydrolase family 17 protein (575 aa)
           
  0.534
Bra015166
AT2G05790 (E=7e-251) | glycosyl hydrolase family 17 protein (473 aa)
           
  0.534
Bra002927
AT5G55180 (E=5e-213) | glycosyl hydrolase family 17 protein (463 aa)
           
  0.534
Bra010076
AT5G62360 (E=6e-064) | invertase/pectin methylesterase inhibitor family protein (198 aa)
           
  0.489
Bra004045
AT1G68190 (E=5e-088) | zinc finger (B-box type) family protein (720 aa)
           
  0.408
Bra003724
AT1G76360 (E=1e-189) | protein kinase, putative (447 aa)
           
  0.406
Bra032714
AT4G24260 (E=3e-018) ATGH9A3, KOR3 | ATGH9A3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A3); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds (183 aa)
   
          0.405
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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