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Bra005579 protein (Brassica rapa) - STRING interaction network
"Bra005579" - AT2G32270 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005579AT2G32270 (E=3e-148) ZIP3 | ZIP3; zinc ion transmembrane transporter (341 aa)    
Predicted Functional Partners:
Bra040053
AT3G08650 (E=3e-203) | metal transporter family protein (630 aa)
       
 
  0.755
Bra031237
AT3G20870 (E=4e-135) | metal transporter family protein (278 aa)
       
 
  0.755
Bra029706
AT3G08650 (E=3e-195) | metal transporter family protein (612 aa)
       
 
  0.755
Bra001350
AT3G08650 (E=1e-264) | metal transporter family protein (596 aa)
       
 
  0.755
Bra004281
AT1G68100 (E=1e-114) IAR1 | IAR1 (IAA-ALANINE RESISTANT 1); metal ion transmembrane transporter (426 aa)
       
 
  0.661
Bra004051
AT1G68100 (E=1e-162) IAR1 | IAR1 (IAA-ALANINE RESISTANT 1); metal ion transmembrane transporter (458 aa)
       
 
  0.661
Bra020314
AT5G59520 (E=4e-148) ZIP2 | ZIP2; copper ion transmembrane transporter/ transferase, transferring glycosyl groups / zinc ion transmembrane transporter (356 aa)
     
   
  0.514
Bra040484
AT2G46790 (E=2e-152) APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription regulator/ two-component response regulator (824 aa)
     
   
  0.504
Bra034779
AT3G12100 (E=1e-198) | cation efflux family protein / metal tolerance protein, putative (390 aa)
     
   
  0.501
Bra025618
AT2G04620 (E=3e-223) | cation efflux family protein (765 aa)
     
   
  0.501
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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