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Bra005596 protein (Brassica rapa) - STRING interaction network
"Bra005596" - AT2G32440 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005596AT2G32440 (E=2e-251) KAO2, CYP88A4 | KAO2 (ENT-KAURENOIC ACID HYDROXYLASE 2); ent-kaurenoate oxidase/ oxygen binding (489 aa)    
Predicted Functional Partners:
Bra009868
AT5G25900 (E=5e-234) GA3, CYP701A3, ATKO1 | GA3 (GA REQUIRING 3); ent-kaurene oxidase/ oxygen binding (503 aa)
   
 
  0.966
Bra028277
AT5G51810 (E=6e-181) GA20OX2, AT2353, ATGA20OX2 | GA20OX2 (GIBBERELLIN 20 OXIDASE 2); gibberellin 20-oxidase (380 aa)
       
  0.941
Bra022565
AT5G51810 (E=7e-203) GA20OX2, AT2353, ATGA20OX2 | GA20OX2 (GIBBERELLIN 20 OXIDASE 2); gibberellin 20-oxidase (377 aa)
       
  0.941
Bra019165
AT4G25420 (E=1e-175) GA5, GA20OX1, AT2301, ATGA20OX1 | GA20OX1; gibberellin 20-oxidase (350 aa)
       
  0.941
Bra013890
AT4G25420 (E=1e-187) GA5, GA20OX1, AT2301, ATGA20OX1 | GA20OX1; gibberellin 20-oxidase (376 aa)
       
  0.941
Bra030681
AT1G07420 (E=2e-155) ATSMO2, SMO2-1 | SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase (517 aa)
     
  0.905
Bra036289
AT4G34890 (E=0.0) ATXDH1, XDH1 | XDH1 (XANTHINE DEHYDROGENASE 1); xanthine dehydrogenase (1355 aa)
         
  0.895
Bra034975
AT3G43600 (E=0.0) AAO2 | AAO2 (ALDEHYDE OXIDASE 2); aldehyde oxidase (1244 aa)
         
  0.895
Bra020140
AT5G20960 (E=0.0) AAO1, AO1, ATAO, ATAO1 | AAO1 (ARABIDOPSIS ALDEHYDE OXIDASE 1); aldehyde oxidase/ indole-3-acetaldehyde oxidase (1347 aa)
         
  0.895
Bra019448
AT3G43600 (E=0.0) AAO2 | AAO2 (ALDEHYDE OXIDASE 2); aldehyde oxidase (1299 aa)
         
  0.895
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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