STRINGSTRING
Bra005623 protein (Brassica rapa) - STRING interaction network
"Bra005623" - AT2G31945 in Brassica rapa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005623AT2G31945 (E=4e-026) | unknown protein (97 aa)    
Predicted Functional Partners:
Bra037131
AT5G66985 (E=2e-027) | unknown protein (87 aa)
           
  0.478
Bra033026
AT3G27770 (E=4e-147) | unknown protein (313 aa)
           
  0.478
Bra025747
AT1G19530 (E=4e-031) | unknown protein (111 aa)
           
  0.478
Bra023304
AT1G33055 (E=2e-019) | unknown protein (66 aa)
           
  0.478
Bra023304.1-P
AT1G33055 (E=2e-019) | unknown protein (66 aa)
           
  0.478
Bra013763
AT4G24110 (E=7e-075) | unknown protein (247 aa)
           
  0.477
Bra025044
AT5G46020 (E=2e-043) | unknown protein (164 aa)
           
  0.476
Bra022010
AT5G46020 (E=3e-040) | unknown protein (165 aa)
           
  0.476
Bra025259
AT3G27220 (E=6e-217) | kelch repeat-containing protein (424 aa)
           
  0.452
Bra034595
AT4G33980 (E=2e-034) | unknown protein (240 aa)
           
  0.406
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
Server load: low (9%) [HD]