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Bra005637 protein (Brassica rapa) - STRING interaction network
"Bra005637" - AT2G31865 in Brassica rapa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bra005637AT2G31865 (E=4e-118) | poly (ADP-ribose) glycohydrolase (PARG) family protein (569 aa)    
Predicted Functional Partners:
Bra027296
AT3G14890 (E=3e-166) | phosphoesterase (602 aa)
       
  0.876
Bra001572
AT3G14890 (E=7e-126) | phosphoesterase (460 aa)
       
  0.876
Bra018555
AT4G02390 (E=4e-256) APP, PARP1, ATPARP1 | APP (ARABIDOPSIS POLY(ADP-RIBOSE) POLYMERASE); NAD+ ADP-ribosyltransferase/ nucleic acid binding (614 aa)
       
  0.871
Bra018259
AT2G31320 (E=0.0) PARP2, ATPARP2 | PARP2 (POLY(ADP-RIBOSE) POLYMERASE 2); DNA binding / NAD or NADH binding / NAD+ ADP-ribosyltransferase/ zinc ion binding (993 aa)
       
  0.871
Bra002414
AT5G22470 (E=0.0) | NAD+ ADP-ribosyltransferase (809 aa)
       
  0.871
Bra000883
AT4G02390 (E=5e-298) APP, PARP1, ATPARP1 | APP (ARABIDOPSIS POLY(ADP-RIBOSE) POLYMERASE); NAD+ ADP-ribosyltransferase/ nucleic acid binding (633 aa)
       
  0.871
Bra008474
AT1G80410 (E=0.0) EMB2753 | EMB2753 (EMBRYO DEFECTIVE 2753); binding (1274 aa)
     
   
  0.477
Your Current Organism:
Brassica rapa
NCBI taxonomy Id: 3711
Other names: B. rapa, Brassica, Brassica L., Brassica rapa, Brassica rapa L., Brassiceae, field mustard
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